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Laboratory Methods5 min read

Understanding RP-HPLC purity testing.

A plain-language guide to how reversed-phase HPLC estimates peptide purity.

How the method works

In reversed-phase high-performance liquid chromatography, a dissolved sample is pushed through a column packed with a water-repelling material. Different molecules travel through the column at different speeds, so they leave at different times.

A detector records each component as a peak. The result is a chromatogram: a chart of peaks over time.

How purity is reported

Area purity compares the area of the main peak with the total area of all detected peaks. A result such as 98.4% means the main peak made up that share of what the detector saw under those conditions.

Limits to keep in mind

  • It only reflects components the detector can see under the chosen conditions.
  • It does not measure how much peptide is in a vial.
  • It does not test for sterility, endotoxins, or heavy metals.
  • It is usually paired with an identity method, because a pure peak could still be the wrong compound.

RP-HPLC separates the components of a sample and reports the main peak as a share of the total.

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